USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9GZV4 USC-OGP 2-DE database:  Q9GZV4 Q9GZV4 General information about the entry View entry in simple text format Entry name IF5A2_HUMAN Primary accession number Q9GZV4 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; Short=eIF-5A2; AltName: Full=Eukaryotic initiation factor 5A isoform 2;. Gene name Name=EIF5A2 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1329: pI=4.39; Mw=16914 Cross-references UniProtKB/Swiss-Prot Q9GZV4; IF5A2_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name IF5A2_HUMAN Primary accession number Q9GZV4 Secondary accession number(s) B2R4V5 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 144) Name and origin of the protein Description RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; Short=eIF-5A2; AltName: Full=Eukaryotic initiation factor 5A isoform 2; Gene name Name=EIF5A2 Encoded on Name=EIF5A2 Keywords Acetylation; Complete proteome; Cytoplasm; Elongation factor; Endoplasmic reticulum; Hypusine; Membrane; mRNA transport; Nuclear pore complex; Nucleus; Polymorphism; Protein biosynthesis; Protein transport; Reference proteome; RNA-binding; Translocation; Transport. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF262027; AAF98810.1; -; mRNA EMBL AF293387; AAG23176.1; -; Genomic_DNA EMBL AF293386; AAG23176.1; JOINED; Genomic_DNA EMBL AY205258; AAO18676.1; -; mRNA EMBL AY205259; AAO18677.1; -; mRNA EMBL AY205260; AAO18678.1; -; mRNA EMBL AY205261; AAO18679.1; -; mRNA EMBL AK311962; BAG34902.1; -; mRNA EMBL CH471052; EAW78501.1; -; Genomic_DNA EMBL BC036072; AAH36072.1; -; mRNA CCDS CCDS3214.1; -; . RefSeq NP_065123.1; NM_020390.5; . UniGene Hs.164144; -; . ProteinModelPortal Q9GZV4; -; . SMR Q9GZV4; -; . BioGrid 121162; 20; . IntAct Q9GZV4; 12; . MINT MINT-1453868; -; . STRING 9606.ENSP00000295822; -; . TCDB 1.I.1.1.3; the nuclear pore complex (npc) family; . iPTMnet Q9GZV4; -; . PhosphoSitePlus Q9GZV4; -; . SwissPalm Q9GZV4; -; . BioMuta EIF5A2; -; . DMDM 74762725; -; . EPD Q9GZV4; -; . MaxQB Q9GZV4; -; . PaxDb Q9GZV4; -; . PeptideAtlas Q9GZV4; -; . PRIDE Q9GZV4; -; . DNASU 56648; -; . Ensembl ENST00000295822; ENSP00000295822; ENSG00000163577; . GeneID 56648; -; . KEGG hsa:56648; -; . UCSC uc003fhd.4; human; . CTD 56648; -; . DisGeNET 56648; -; . GeneCards EIF5A2; -; . HGNC HGNC:3301; EIF5A2; . HPA HPA029090; -; . MIM 605782; gene; . neXtProt NX_Q9GZV4; -; . OpenTargets ENSG00000163577; -; . PharmGKB PA27727; -; . eggNOG KOG3271; Eukaryota; . eggNOG COG0231; LUCA; . GeneTree ENSGT00390000003738; -; . HOGENOM HOG000106270; -; . HOVERGEN HBG001104; -; . InParanoid Q9GZV4; -; . KO K03263; -; . OMA ASETYPM; -; . OrthoDB EOG091G0P2P; -; . PhylomeDB Q9GZV4; -; . TreeFam TF101534; -; . Reactome R-HSA-204626; Hypusine synthesis from eIF5A-lysine; . ChiTaRS EIF5A2; human; . GeneWiki EIF5A2; -; . GenomeRNAi 56648; -; . PRO PR:Q9GZV4; -; . Proteomes UP000005640; Chromosome 3; . Bgee ENSG00000163577; -; . CleanEx HS_EIF5A2; -; . ExpressionAtlas Q9GZV4; baseline and differential; . Genevisible Q9GZV4; HS; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell; . GO GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA; . GO GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell; . GO GO:0043022; F:ribosome binding; IEA:InterPro; . GO GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW; . GO GO:0051028; P:mRNA transport; IEA:UniProtKB-KW; . GO GO:0008612; P:peptidyl-lysine modification to peptidyl-hypusine; TAS:Reactome; . GO GO:0010509; P:polyamine homeostasis; NAS:UniProtKB; . GO GO:0008284; P:positive regulation of cell proliferation; IGI:UniProtKB; . GO GO:0045901; P:positive regulation of translational elongation; IEA:InterPro; . GO GO:0045905; P:positive regulation of translational termination; IEA:InterPro; . GO GO:0015031; P:protein transport; IEA:UniProtKB-KW; . GO GO:0007283; P:spermatogenesis; NAS:UniProtKB; . GO GO:0006452; P:translational frameshifting; IEA:InterPro; . Gene3D 2.30.30.30; -; 1; . InterPro IPR012340; NA-bd_OB-fold; . InterPro IPR014722; Rib_L2_dom2; . InterPro IPR019769; Trans_elong_IF5A_hypusine_site; . InterPro IPR001884; Transl_elong_IF5A; . InterPro IPR020189; Transl_elong_IF5A_C; . InterPro IPR008991; Translation_prot_SH3-like; . PANTHER PTHR11673; PTHR11673; 1; . Pfam PF01287; eIF-5a; 1; . PIRSF PIRSF003025; eIF5A; 1; . SMART SM01376; eIF-5a; 1; . SUPFAM SSF50104; SSF50104; 1; . SUPFAM SSF50249; SSF50249; 1; . TIGRFAMs TIGR00037; eIF_5A; 1; . PROSITE PS00302; IF5A_HYPUSINE; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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